Dca4096.1
Annotation
- 4-exons
- f-1
- sp|D7KIE8_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_473481#GO:0005840;GO:0003735;GO:0006412#1F1P1C
- AT1G32990.1 | Symbols: PRPL11 | plastid ribosomal protein l11 | chr1:11955827-11957139 FORWARD LENGTH=222
- Repeat List (scaffold1150)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca4096.1 |
39 |
236 |
237 |
63.71 |
198 |
74 |
1e-77
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D7KIE8_ARALL |
22 |
221 |
222 |
90.09 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca4096.1 |
37 |
236 |
237 |
63.71 |
200 |
73 |
4e-79
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G32990.1 |
20 |
221 |
222 |
90.99 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1150 |
Augus-PASA |
mRNA |
56459 |
57893 |
. |
+ |
. |
ID=Dca4096.1;Parent=Dca4096 |
| scaffold1150 |
Augus-PASA |
exon |
56459 |
56723 |
. |
+ |
. |
ID=Dca4096.1.exon1;Parent=Dca4096.1 |
| scaffold1150 |
Augus-PASA |
exon |
56875 |
57047 |
. |
+ |
. |
ID=Dca4096.1.exon2;Parent=Dca4096.1 |
| scaffold1150 |
Augus-PASA |
exon |
57293 |
57356 |
. |
+ |
. |
ID=Dca4096.1.exon3;Parent=Dca4096.1 |
| scaffold1150 |
Augus-PASA |
exon |
57682 |
57893 |
. |
+ |
. |
ID=Dca4096.1.exon4;Parent=Dca4096.1 |
