Carnation DB

Dca40967.1

Annotation

6-exons
f-1
sp|B9S0U8_RICCO#Protein translocase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1537630#GO:0016021#0F0P1C
Repeat List (scaffold451)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40967.1	14	253	255	58.82	240	60	3e-79
Target_name	Start	End	Length	Cov(%)
sp\|B9S0U8_RICCO	12	257	261	94.25

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca40967.1	19	254	255	50.58	236	55	2e-64
Target_name	Start	End	Length	Cov(%)
AT5G24650.1	24	256	259	89.96

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold451	Augustus	mRNA	27770	30481	.	+	.	ID=Dca40967.1;Parent=Dca40967
scaffold451	Augustus	exon	27770	28036	.	+	.	ID=Dca40967.1.exon1;Parent=Dca40967.1
scaffold451	Augustus	exon	29120	29235	.	+	.	ID=Dca40967.1.exon2;Parent=Dca40967.1
scaffold451	Augustus	exon	29314	29440	.	+	.	ID=Dca40967.1.exon3;Parent=Dca40967.1
scaffold451	Augustus	exon	29802	29962	.	+	.	ID=Dca40967.1.exon4;Parent=Dca40967.1
scaffold451	Augustus	exon	30286	30348	.	+	.	ID=Dca40967.1.exon5;Parent=Dca40967.1
scaffold451	Augustus	exon	30448	30481	.	+	.	ID=Dca40967.1.exon6;Parent=Dca40967.1