Dca41.1
Annotation
- 6-exons
- f-1
- sp|C5WUM5_SORBI#Putative uncharacterized protein Sb01g031260#Sorghum bicolor (Sorghum) (Sorghum vulgare)#Name=Sb01g031260#GO:0016021;GO:0051205#0F1P1C
- sp|B9SWW1_RICCO#Cytochrome oxidase biogenesis protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0566140#GO:0016021;GO:0051205#0F1P1C
- Repeat List (scaffold1)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca41.1 |
104 |
372 |
381 |
37.27 |
269 |
43 |
5e-64
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|C5WUM5_SORBI |
98 |
420 |
420 |
76.9 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca41.1 |
1 |
373 |
381 |
40.41 |
373 |
35 |
6e-60
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G62050.1 |
1 |
429 |
429 |
100 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1 |
Augustus |
mRNA |
424478 |
427527 |
. |
+ |
. |
ID=Dca41.1;Parent=Dca41 |
| scaffold1 |
Augustus |
exon |
424478 |
424944 |
. |
+ |
. |
ID=Dca41.1.exon1;Parent=Dca41.1 |
| scaffold1 |
Augustus |
exon |
425386 |
425476 |
. |
+ |
. |
ID=Dca41.1.exon2;Parent=Dca41.1 |
| scaffold1 |
Augustus |
exon |
426355 |
426486 |
. |
+ |
. |
ID=Dca41.1.exon3;Parent=Dca41.1 |
| scaffold1 |
Augustus |
exon |
426568 |
426675 |
. |
+ |
. |
ID=Dca41.1.exon4;Parent=Dca41.1 |
| scaffold1 |
Augustus |
exon |
426867 |
426921 |
. |
+ |
. |
ID=Dca41.1.exon5;Parent=Dca41.1 |
| scaffold1 |
Augustus |
exon |
427235 |
427527 |
. |
+ |
. |
ID=Dca41.1.exon6;Parent=Dca41.1 |
