Carnation DB

Dca41140.1

Annotation

11-exons
f-1
sp|D7UAJ5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_19s0015g00760#unknown#0F0P0C
AT1G55840.1 | Symbols: | Sec14p-like phosphatidylinositol transfer family protein | chr1:20873891-20876018 FORWARD LENGTH=325
Repeat List (scaffold454)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca41140.1	1	341	352	73.86	341	77	9e-153
Target_name	Start	End	Length	Cov(%)
sp\|D7UAJ5_VITVI	1	331	338	97.92

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca41140.1	1	331	352	65.34	331	70	1e-140
Target_name	Start	End	Length	Cov(%)
AT1G55840.1	1	324	325	99.69

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold454	Augus-PASA	mRNA	46012	49651	.	-	.	ID=Dca41140.1;Parent=Dca41140
scaffold454	Augus-PASA	exon	46012	46356	.	-	.	ID=Dca41140.1.exon1;Parent=Dca41140.1
scaffold454	Augus-PASA	exon	46881	46961	.	-	.	ID=Dca41140.1.exon2;Parent=Dca41140.1
scaffold454	Augus-PASA	exon	47047	47148	.	-	.	ID=Dca41140.1.exon3;Parent=Dca41140.1
scaffold454	Augus-PASA	exon	47256	47351	.	-	.	ID=Dca41140.1.exon4;Parent=Dca41140.1
scaffold454	Augus-PASA	exon	47432	47491	.	-	.	ID=Dca41140.1.exon5;Parent=Dca41140.1
scaffold454	Augus-PASA	exon	47764	47838	.	-	.	ID=Dca41140.1.exon6;Parent=Dca41140.1
scaffold454	Augus-PASA	exon	47914	47991	.	-	.	ID=Dca41140.1.exon7;Parent=Dca41140.1
scaffold454	Augus-PASA	exon	48366	48419	.	-	.	ID=Dca41140.1.exon8;Parent=Dca41140.1
scaffold454	Augus-PASA	exon	48507	48590	.	-	.	ID=Dca41140.1.exon9;Parent=Dca41140.1
scaffold454	Augus-PASA	exon	49444	49472	.	-	.	ID=Dca41140.1.exon10;Parent=Dca41140.1
scaffold454	Augus-PASA	exon	49597	49651	.	-	.	ID=Dca41140.1.exon11;Parent=Dca41140.1
scaffold454	Augus-PASA	mRNA	46012	49651	.	-	.	ID=Dca41140.2;Parent=Dca41140
scaffold454	Augus-PASA	exon	46012	46356	.	-	.	ID=Dca41140.2.exon1;Parent=Dca41140.2
scaffold454	Augus-PASA	exon	46881	46961	.	-	.	ID=Dca41140.2.exon2;Parent=Dca41140.2
scaffold454	Augus-PASA	exon	47047	47148	.	-	.	ID=Dca41140.2.exon3;Parent=Dca41140.2
scaffold454	Augus-PASA	exon	47256	47351	.	-	.	ID=Dca41140.2.exon4;Parent=Dca41140.2
scaffold454	Augus-PASA	exon	47432	47491	.	-	.	ID=Dca41140.2.exon5;Parent=Dca41140.2
scaffold454	Augus-PASA	exon	47764	47817	.	-	.	ID=Dca41140.2.exon6;Parent=Dca41140.2
scaffold454	Augus-PASA	exon	47914	47991	.	-	.	ID=Dca41140.2.exon7;Parent=Dca41140.2
scaffold454	Augus-PASA	exon	48366	48419	.	-	.	ID=Dca41140.2.exon8;Parent=Dca41140.2
scaffold454	Augus-PASA	exon	48507	48590	.	-	.	ID=Dca41140.2.exon9;Parent=Dca41140.2
scaffold454	Augus-PASA	exon	49444	49472	.	-	.	ID=Dca41140.2.exon10;Parent=Dca41140.2
scaffold454	Augus-PASA	exon	49597	49651	.	-	.	ID=Dca41140.2.exon11;Parent=Dca41140.2