Carnation DB

Dca4131.1

Annotation

5-exons
f-1
sp|A9PCC5_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_556174#unknown#0F0P0C
Repeat List (scaffold1152)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4131.1	1	376	570	30.17	376	46	6e-91
Target_name	Start	End	Length	Cov(%)
sp\|A9PCC5_POPTR	1	367	392	93.62

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4131.1	1	375	570	28.77	375	41	1e-74
Target_name	Start	End	Length	Cov(%)
AT1G61600.1	1	395	421	93.82

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1152	Augustus	mRNA	56700	60695	.	+	.	ID=Dca4131.1;Parent=Dca4131
scaffold1152	Augustus	exon	56700	57019	.	+	.	ID=Dca4131.1.exon1;Parent=Dca4131.1
scaffold1152	Augustus	exon	57710	58084	.	+	.	ID=Dca4131.1.exon2;Parent=Dca4131.1
scaffold1152	Augustus	exon	58332	58730	.	+	.	ID=Dca4131.1.exon3;Parent=Dca4131.1
scaffold1152	Augustus	exon	59478	59814	.	+	.	ID=Dca4131.1.exon4;Parent=Dca4131.1
scaffold1152	Augustus	exon	60414	60695	.	+	.	ID=Dca4131.1.exon5;Parent=Dca4131.1