Carnation DB

Dca41396.1

Annotation

5-exons
f-1
sp|A5C277_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_009673#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
Os08t0202300-03 Reverse transcriptase domain containing protein.
Repeat List (scaffold4592)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca41396.1	134	517	517	39.65	384	49	1e-105
Target_name	Start	End	Length	Cov(%)
sp\|A5C277_VITVI	623	1042	2377	17.66

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca41396.1	337	512	517	11.99	176	36	5e-22
Target_name	Start	End	Length	Cov(%)
Os12t0142900-02	229	386	707	22.34

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4592	Augustus	mRNA	6608	8609	.	+	.	ID=Dca41396.1;Parent=Dca41396
scaffold4592	Augustus	exon	6608	6860	.	+	.	ID=Dca41396.1.exon1;Parent=Dca41396.1
scaffold4592	Augustus	exon	6935	7078	.	+	.	ID=Dca41396.1.exon2;Parent=Dca41396.1
scaffold4592	Augustus	exon	7267	7700	.	+	.	ID=Dca41396.1.exon3;Parent=Dca41396.1
scaffold4592	Augustus	exon	7788	7944	.	+	.	ID=Dca41396.1.exon4;Parent=Dca41396.1
scaffold4592	Augustus	exon	8044	8609	.	+	.	ID=Dca41396.1.exon5;Parent=Dca41396.1