Carnation DB

Dca4140.1

Annotation

7-exons
f-1
sp|D8RZ73_SELML#Putative uncharacterized protein#Selaginella moellendorffii (Spikemoss)#ORFNames=SELMODRAFT_443169#unknown#0F0P0C
sp|G7K419_MEDTR#LSM14-like protein#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_5g025630#unknown#0F0P0C
Repeat List (scaffold1152)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4140.1	3	382	406	35.71	380	31	3e-39
Target_name	Start	End	Length	Cov(%)
sp\|D8RZ73_SELML	2	473	853	55.33

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4140.1	291	384	406	12.06	94	52	1e-22
Target_name	Start	End	Length	Cov(%)
AT1G26110.1	461	555	611	15.54

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1152	Augustus	mRNA	121000	124324	.	-	.	ID=Dca4140.1;Parent=Dca4140
scaffold1152	Augustus	exon	121000	121089	.	-	.	ID=Dca4140.1.exon1;Parent=Dca4140.1
scaffold1152	Augustus	exon	121192	121302	.	-	.	ID=Dca4140.1.exon2;Parent=Dca4140.1
scaffold1152	Augustus	exon	121411	121581	.	-	.	ID=Dca4140.1.exon3;Parent=Dca4140.1
scaffold1152	Augustus	exon	121692	122198	.	-	.	ID=Dca4140.1.exon4;Parent=Dca4140.1
scaffold1152	Augustus	exon	122752	122820	.	-	.	ID=Dca4140.1.exon5;Parent=Dca4140.1
scaffold1152	Augustus	exon	123035	123135	.	-	.	ID=Dca4140.1.exon6;Parent=Dca4140.1
scaffold1152	Augustus	exon	124153	124324	.	-	.	ID=Dca4140.1.exon7;Parent=Dca4140.1