Dca41719.1
Annotation
- 4-exons
- f-454
- sp|Q9XII7_ARATH#Putative retroelement pol polyprotein#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g16000#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold4641)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca41719.1 |
2 |
240 |
243 |
33.33 |
239 |
34 |
2e-39
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9XII7_ARATH |
693 |
919 |
1454 |
15.61 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca41719.1 |
4 |
147 |
243 |
20.57 |
144 |
35 |
8e-20
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
638 |
781 |
1428 |
10.08 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4641 |
Augustus |
mRNA |
15556 |
17541 |
. |
+ |
. |
ID=Dca41719.1;Parent=Dca41719 |
| scaffold4641 |
Augustus |
exon |
15556 |
15820 |
. |
+ |
. |
ID=Dca41719.1.exon1;Parent=Dca41719.1 |
| scaffold4641 |
Augustus |
exon |
15915 |
15965 |
. |
+ |
. |
ID=Dca41719.1.exon2;Parent=Dca41719.1 |
| scaffold4641 |
Augustus |
exon |
16069 |
16207 |
. |
+ |
. |
ID=Dca41719.1.exon3;Parent=Dca41719.1 |
| scaffold4641 |
Augustus |
exon |
16812 |
17541 |
. |
+ |
. |
ID=Dca41719.1.exon4;Parent=Dca41719.1 |
