Carnation DB

Dca4180.1

Annotation

7-exons
f-1
sp|D7TGT4_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_12s0035g00970#unknown#0F0P0C
sp|B9SKD3_RICCO#Yth domain-containing protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0759470#unknown#0F0P0C
Repeat List (scaffold1154)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4180.1	105	527	532	40.78	423	46	8e-104
Target_name	Start	End	Length	Cov(%)
sp\|D7TGT4_VITVI	205	678	708	66.94

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4180.1	249	509	532	28.19	261	56	1e-85
Target_name	Start	End	Length	Cov(%)
AT1G09810.1	159	424	470	56.59

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1154	Augustus	mRNA	69599	72788	.	-	.	ID=Dca4180.1;Parent=Dca4180
scaffold1154	Augustus	exon	69599	69691	.	-	.	ID=Dca4180.1.exon1;Parent=Dca4180.1
scaffold1154	Augustus	exon	69814	69990	.	-	.	ID=Dca4180.1.exon2;Parent=Dca4180.1
scaffold1154	Augustus	exon	70232	70444	.	-	.	ID=Dca4180.1.exon3;Parent=Dca4180.1
scaffold1154	Augustus	exon	71005	71502	.	-	.	ID=Dca4180.1.exon4;Parent=Dca4180.1
scaffold1154	Augustus	exon	71757	72185	.	-	.	ID=Dca4180.1.exon5;Parent=Dca4180.1
scaffold1154	Augustus	exon	72302	72354	.	-	.	ID=Dca4180.1.exon6;Parent=Dca4180.1
scaffold1154	Augustus	exon	72653	72788	.	-	.	ID=Dca4180.1.exon7;Parent=Dca4180.1