Carnation DB

Dca41966.1

Annotation

6-exons
f-1
sp|E7BQD5_SILLA#Gag-pol polyprotein#Silene latifolia (White campion) (Bladder campion)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
Repeat List (scaffold4691)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca41966.1	155	414	414	49.03	260	70	8e-110
Target_name	Start	End	Length	Cov(%)
sp\|E7BQD5_SILLA	491	781	1475	19.72

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca41966.1	1	169	414	23.42	169	58	2e-53
Target_name	Start	End	Length	Cov(%)
AT1G76520.1	2	171	390	43.58

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4691	Augustus	mRNA	1629	9892	.	+	.	ID=Dca41966.1;Parent=Dca41966
scaffold4691	Augustus	exon	1629	1763	.	+	.	ID=Dca41966.1.exon1;Parent=Dca41966.1
scaffold4691	Augustus	exon	1866	1945	.	+	.	ID=Dca41966.1.exon2;Parent=Dca41966.1
scaffold4691	Augustus	exon	2035	2159	.	+	.	ID=Dca41966.1.exon3;Parent=Dca41966.1
scaffold4691	Augustus	exon	2480	2601	.	+	.	ID=Dca41966.1.exon4;Parent=Dca41966.1
scaffold4691	Augustus	exon	9018	9275	.	+	.	ID=Dca41966.1.exon5;Parent=Dca41966.1
scaffold4691	Augustus	exon	9368	9892	.	+	.	ID=Dca41966.1.exon6;Parent=Dca41966.1