Carnation DB

Dca42003.1

Annotation

6-exons
f-1
sp|D7TIS7_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0007g04890#GO:0016597;GO:0008152#1F1P0C
AT2G36840.1 | Symbols: | ACT-like superfamily protein | chr2:15451834-15453550 REVERSE LENGTH=410
Repeat List (scaffold47)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42003.1	1	410	412	64.8	410	65	2e-153
Target_name	Start	End	Length	Cov(%)
sp\|D7TIS7_VITVI	1	409	411	99.51

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42003.1	1	410	412	55.82	410	56	2e-130
Target_name	Start	End	Length	Cov(%)
AT2G36840.1	1	408	410	99.51

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold47	Augustus	mRNA	2293	5633	.	+	.	ID=Dca42003.1;Parent=Dca42003
scaffold47	Augustus	exon	2293	2446	.	+	.	ID=Dca42003.1.exon1;Parent=Dca42003.1
scaffold47	Augustus	exon	4005	4226	.	+	.	ID=Dca42003.1.exon2;Parent=Dca42003.1
scaffold47	Augus-PASA	exon	4316	4421	.	+	.	ID=Dca42003.1.exon3;Parent=Dca42003.1
scaffold47	Augus-PASA	exon	4649	4982	.	+	.	ID=Dca42003.1.exon4;Parent=Dca42003.1
scaffold47	Augus-PASA	exon	5120	5404	.	+	.	ID=Dca42003.1.exon5;Parent=Dca42003.1
scaffold47	Augus-PASA	exon	5496	5633	.	+	.	ID=Dca42003.1.exon6;Parent=Dca42003.1