Carnation DB

Dca4229.1

Annotation

6-exons
f-1
sp|B9T7Z1_RICCO#Peptidyl-prolyl cis-trans isomerase#Ricinus communis (Castor bean)#ORFNames=RCOM_0242140#GO:0003755;GO:0006457#1F1P0C
Repeat List (scaffold1157)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4229.1	4	146	162	72.22	143	82	6e-63
Target_name	Start	End	Length	Cov(%)
sp\|B9T7Z1_RICCO	5	147	149	95.97

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4229.1	17	145	162	67.28	129	85	4e-61
Target_name	Start	End	Length	Cov(%)
AT3G25220.1	23	151	153	84.31

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1157	Augus-PASA	mRNA	43404	46618	.	-	.	ID=Dca4229.1;Parent=Dca4229
scaffold1157	Augus-PASA	exon	43404	43534	.	-	.	ID=Dca4229.1.exon1;Parent=Dca4229.1
scaffold1157	Augus-PASA	exon	43962	44066	.	-	.	ID=Dca4229.1.exon2;Parent=Dca4229.1
scaffold1157	Augus-PASA	exon	44924	45014	.	-	.	ID=Dca4229.1.exon3;Parent=Dca4229.1
scaffold1157	Augus-PASA	exon	45126	45188	.	-	.	ID=Dca4229.1.exon4;Parent=Dca4229.1
scaffold1157	Augus-PASA	exon	46409	46458	.	-	.	ID=Dca4229.1.exon5;Parent=Dca4229.1
scaffold1157	Augus-PASA	exon	46570	46618	.	-	.	ID=Dca4229.1.exon6;Parent=Dca4229.1