Carnation DB

Dca4239.1

Annotation

6-exons
f-1
sp|F6GZD0_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VIT_00s0574g00030#GO:0008270#1F0P0C
Repeat List (scaffold1157)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4239.1	1	185	209	36.84	185	41	3e-15
Target_name	Start	End	Length	Cov(%)
sp\|F6GZD0_VITVI	1	155	209	74.16

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4239.1	27	140	209	23.92	114	43	4e-12
Target_name	Start	End	Length	Cov(%)
AT5G48655.2	19	121	203	50.73

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1157	Augus-PASA	mRNA	145795	148541	.	-	.	ID=Dca4239.1;Parent=Dca4239
scaffold1157	Augus-PASA	exon	145795	145813	.	-	.	ID=Dca4239.1.exon1;Parent=Dca4239.1
scaffold1157	Augustus	exon	146446	146501	.	-	.	ID=Dca4239.1.exon2;Parent=Dca4239.1
scaffold1157	Augustus	exon	146612	146722	.	-	.	ID=Dca4239.1.exon3;Parent=Dca4239.1
scaffold1157	Augus-PASA	exon	147520	147638	.	-	.	ID=Dca4239.1.exon4;Parent=Dca4239.1
scaffold1157	Augus-PASA	exon	148117	148174	.	-	.	ID=Dca4239.1.exon5;Parent=Dca4239.1
scaffold1157	Augustus	exon	148275	148541	.	-	.	ID=Dca4239.1.exon6;Parent=Dca4239.1