Dca42502.1
Annotation
- 3-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- sp|G0Y6U4_ARAHY#Retrotransposon gag protein#Arachis hypogaea (Peanut)#ORFNames=303L13_14#unknown#0F0P0C
- Repeat List (scaffold4780)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca42502.1 |
178 |
387 |
496 |
27.21 |
210 |
65 |
1e-74
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
519 |
728 |
1717 |
12.23 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca42502.1 |
173 |
253 |
496 |
5.24 |
81 |
33 |
5e-06
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0292200-01 |
110 |
189 |
192 |
41.66 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4780 |
Augustus |
mRNA |
18785 |
23571 |
. |
+ |
. |
ID=Dca42502.1;Parent=Dca42502 |
| scaffold4780 |
Augustus |
exon |
18785 |
19087 |
. |
+ |
. |
ID=Dca42502.1.exon1;Parent=Dca42502.1 |
| scaffold4780 |
Augustus |
exon |
22115 |
22322 |
. |
+ |
. |
ID=Dca42502.1.exon2;Parent=Dca42502.1 |
| scaffold4780 |
Augustus |
exon |
22592 |
23571 |
. |
+ |
. |
ID=Dca42502.1.exon3;Parent=Dca42502.1 |
