Dca42518.1
Annotation
- 3-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold4783)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca42518.1 |
41 |
392 |
401 |
33.66 |
352 |
31 |
9e-48
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
41 |
480 |
1501 |
29.31 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca42518.1 |
36 |
135 |
401 |
7.98 |
100 |
32 |
4e-07
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0315200-01 |
80 |
179 |
296 |
33.78 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4783 |
Augustus |
mRNA |
2749 |
4141 |
. |
+ |
. |
ID=Dca42518.1;Parent=Dca42518 |
| scaffold4783 |
Augustus |
exon |
2749 |
3151 |
. |
+ |
. |
ID=Dca42518.1.exon1;Parent=Dca42518.1 |
| scaffold4783 |
Augustus |
exon |
3238 |
3485 |
. |
+ |
. |
ID=Dca42518.1.exon2;Parent=Dca42518.1 |
| scaffold4783 |
Augustus |
exon |
3587 |
4141 |
. |
+ |
. |
ID=Dca42518.1.exon3;Parent=Dca42518.1 |
