Dca42545.1
Annotation
- 4-exons
- f-313
- sp|B9HW60_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_726875#unknown#0F0P0C
- Os11t0610700-01 WD40 repeat-like domain containing protein.
- Repeat List (scaffold4788)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca42545.1 |
1 |
73 |
76 |
59.21 |
73 |
60 |
5e-19
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9HW60_POPTR |
116 |
191 |
370 |
20.54 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca42545.1 |
1 |
73 |
76 |
50 |
73 |
50 |
3e-16
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0610700-01 |
112 |
187 |
405 |
18.76 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4788 |
Augustus |
mRNA |
13229 |
15126 |
. |
- |
. |
ID=Dca42545.1;Parent=Dca42545 |
| scaffold4788 |
Augustus |
exon |
13229 |
13403 |
. |
- |
. |
ID=Dca42545.1.exon1;Parent=Dca42545.1 |
| scaffold4788 |
Augustus |
exon |
13764 |
13858 |
. |
- |
. |
ID=Dca42545.1.exon2;Parent=Dca42545.1 |
| scaffold4788 |
Augustus |
exon |
14414 |
14594 |
. |
- |
. |
ID=Dca42545.1.exon3;Parent=Dca42545.1 |
| scaffold4788 |
Augustus |
exon |
15035 |
15126 |
. |
- |
. |
ID=Dca42545.1.exon4;Parent=Dca42545.1 |
