Carnation DB

Dca4256.1

Annotation

7-exons
f-1
sp|B9GX82_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_414862#unknown#0F0P0C
Os03t0110400-01 Similar to nuclear matrix protein-related.
Repeat List (scaffold1158)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4256.1	75	122	130	24.61	48	67	4e-13
Target_name	Start	End	Length	Cov(%)
sp\|B9GX82_POPTR	283	330	611	7.85

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4256.1	75	115	130	20.76	41	66	3e-12
Target_name	Start	End	Length	Cov(%)
AT5G09860.1	290	330	599	6.84

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1158	Augustus	mRNA	76627	79770	.	-	.	ID=Dca4256.1;Parent=Dca4256
scaffold1158	Augustus	exon	76627	76852	.	-	.	ID=Dca4256.1.exon1;Parent=Dca4256.1
scaffold1158	Augustus	exon	77890	77911	.	-	.	ID=Dca4256.1.exon2;Parent=Dca4256.1
scaffold1158	Augustus	exon	78281	78341	.	-	.	ID=Dca4256.1.exon3;Parent=Dca4256.1
scaffold1158	Augustus	exon	78597	78638	.	-	.	ID=Dca4256.1.exon4;Parent=Dca4256.1
scaffold1158	Augustus	exon	79032	79097	.	-	.	ID=Dca4256.1.exon5;Parent=Dca4256.1
scaffold1158	Augustus	exon	79228	79352	.	-	.	ID=Dca4256.1.exon6;Parent=Dca4256.1
scaffold1158	Augustus	exon	79674	79770	.	-	.	ID=Dca4256.1.exon7;Parent=Dca4256.1