Dca42571.1
Annotation
- 3-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold4793)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca42571.1 |
128 |
789 |
793 |
55.86 |
662 |
64 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
754 |
1453 |
1501 |
46.63 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca42571.1 |
129 |
753 |
793 |
29.12 |
625 |
35 |
1e-103
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
781 |
1410 |
1539 |
40.93 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4793 |
Augustus |
mRNA |
14815 |
19825 |
. |
- |
. |
ID=Dca42571.1;Parent=Dca42571 |
| scaffold4793 |
Augustus |
exon |
14815 |
15740 |
. |
- |
. |
ID=Dca42571.1.exon1;Parent=Dca42571.1 |
| scaffold4793 |
Augustus |
exon |
15843 |
16911 |
. |
- |
. |
ID=Dca42571.1.exon2;Parent=Dca42571.1 |
| scaffold4793 |
Augustus |
exon |
19439 |
19825 |
. |
- |
. |
ID=Dca42571.1.exon3;Parent=Dca42571.1 |
