Carnation DB

Dca42597.1

Annotation

7-exons
f-1
sp|B9R9H9_RICCO#F-box and wd40 domain protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1497630#GO:0016905;GO:0003676;GO:0008270#3F0P0C
Repeat List (scaffold48)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42597.1	36	399	399	40.85	364	45	8e-88
Target_name	Start	End	Length	Cov(%)
sp\|B9R9H9_RICCO	36	399	445	81.79

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42597.1	12	399	399	43.6	388	45	1e-85
Target_name	Start	End	Length	Cov(%)
AT4G25440.1	13	383	430	86.27

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold48	Augustus	mRNA	56888	58878	.	-	.	ID=Dca42597.1;Parent=Dca42597
scaffold48	Augustus	exon	56888	56983	.	-	.	ID=Dca42597.1.exon1;Parent=Dca42597.1
scaffold48	Augustus	exon	57098	57157	.	-	.	ID=Dca42597.1.exon2;Parent=Dca42597.1
scaffold48	Augustus	exon	57293	57559	.	-	.	ID=Dca42597.1.exon3;Parent=Dca42597.1
scaffold48	Augustus	exon	57795	57896	.	-	.	ID=Dca42597.1.exon4;Parent=Dca42597.1
scaffold48	Augustus	exon	58001	58090	.	-	.	ID=Dca42597.1.exon5;Parent=Dca42597.1
scaffold48	Augustus	exon	58192	58287	.	-	.	ID=Dca42597.1.exon6;Parent=Dca42597.1
scaffold48	Augustus	exon	58390	58878	.	-	.	ID=Dca42597.1.exon7;Parent=Dca42597.1