Carnation DB

Dca42598.1

Annotation

5-exons
f-1
sp|B9RDK7_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_1613780#unknown#0F0P0C
sp|B9GPV2_POPTR#F-box family protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_552116#unknown#0F0P0C
Repeat List (scaffold48)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42598.1	8	376	390	51.02	369	54	1e-104
Target_name	Start	End	Length	Cov(%)
sp\|B9RDK7_RICCO	6	358	362	97.51

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42598.1	8	383	390	45.64	376	47	2e-90
Target_name	Start	End	Length	Cov(%)
AT4G00755.1	2	374	377	98.93

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold48	Augustus	mRNA	62233	66704	.	+	.	ID=Dca42598.1;Parent=Dca42598
scaffold48	Augustus	exon	62233	62365	.	+	.	ID=Dca42598.1.exon1;Parent=Dca42598.1
scaffold48	Augus-PASA	exon	64338	64757	.	+	.	ID=Dca42598.1.exon2;Parent=Dca42598.1
scaffold48	Augus-PASA	exon	64850	65037	.	+	.	ID=Dca42598.1.exon3;Parent=Dca42598.1
scaffold48	Augus-PASA	exon	65571	65689	.	+	.	ID=Dca42598.1.exon4;Parent=Dca42598.1
scaffold48	Augus-PASA	exon	66392	66704	.	+	.	ID=Dca42598.1.exon5;Parent=Dca42598.1