Carnation DB

Dca42609.1

Annotation

12-exons
f-1
sp|D7U7I5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_15s0048g02010#GO:0005524;GO:0004674#2F0P0C
AT4G00720.1 | Symbols: ATSK32, ASKTHETA, SK32 | shaggy-like protein kinase 32 | chr4:294116-297002 REVERSE LENGTH=472
Repeat List (scaffold48)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42609.1	18	384	384	80.98	367	85	0
Target_name	Start	End	Length	Cov(%)
sp\|D7U7I5_VITVI	102	468	468	78.41

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42609.1	2	381	384	78.64	380	80	0
Target_name	Start	End	Length	Cov(%)
AT4G00720.1	85	464	472	80.5

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold48	Augus-PASA	mRNA	165880	170403	.	+	.	ID=Dca42609.1;Parent=Dca42609
scaffold48	Augus-PASA	exon	165880	165939	.	+	.	ID=Dca42609.1.exon1;Parent=Dca42609.1
scaffold48	Augus-PASA	exon	166992	167084	.	+	.	ID=Dca42609.1.exon2;Parent=Dca42609.1
scaffold48	Augus-PASA	exon	167585	167644	.	+	.	ID=Dca42609.1.exon3;Parent=Dca42609.1
scaffold48	Augus-PASA	exon	167737	168009	.	+	.	ID=Dca42609.1.exon4;Parent=Dca42609.1
scaffold48	Augus-PASA	exon	168195	168269	.	+	.	ID=Dca42609.1.exon5;Parent=Dca42609.1
scaffold48	Augus-PASA	exon	168640	168696	.	+	.	ID=Dca42609.1.exon6;Parent=Dca42609.1
scaffold48	Augus-PASA	exon	168779	168919	.	+	.	ID=Dca42609.1.exon7;Parent=Dca42609.1
scaffold48	Augus-PASA	exon	169044	169094	.	+	.	ID=Dca42609.1.exon8;Parent=Dca42609.1
scaffold48	Augus-PASA	exon	169238	169333	.	+	.	ID=Dca42609.1.exon9;Parent=Dca42609.1
scaffold48	Augustus	exon	169421	169504	.	+	.	ID=Dca42609.1.exon10;Parent=Dca42609.1
scaffold48	Augustus	exon	170157	170259	.	+	.	ID=Dca42609.1.exon11;Parent=Dca42609.1
scaffold48	Augustus	exon	170342	170403	.	+	.	ID=Dca42609.1.exon12;Parent=Dca42609.1