Carnation DB

Dca42612.1

Annotation

6-exons
f-1
sp|D7UC23_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_15s0046g03700#GO:0008831;GO:0000166;GO:0045226#2F1P0C
sp|G7LCN3_MEDTR#Methionine adenosyltransferase 2 subunit beta#Medicago truncatula (Barrel medic) (Medicago tribuloides)#ORFNames=MTR_8g032270#GO:0008831;GO:0000166;GO:0016740;GO:0045226#3F1P0C
Repeat List (scaffold48)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42612.1	1	318	319	70.84	318	72	8e-132
Target_name	Start	End	Length	Cov(%)
sp\|D7UC23_VITVI	1	314	318	98.74

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42612.1	5	318	319	64.89	314	65	3e-119
Target_name	Start	End	Length	Cov(%)
AT4G00560.4	6	323	331	96.07

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold48	Augus-PASA	mRNA	185690	190591	.	+	.	ID=Dca42612.1;Parent=Dca42612
scaffold48	Augus-PASA	exon	185690	185923	.	+	.	ID=Dca42612.1.exon1;Parent=Dca42612.1
scaffold48	Augus-PASA	exon	186496	186655	.	+	.	ID=Dca42612.1.exon2;Parent=Dca42612.1
scaffold48	Augus-PASA	exon	186981	187168	.	+	.	ID=Dca42612.1.exon3;Parent=Dca42612.1
scaffold48	Augus-PASA	exon	187350	187473	.	+	.	ID=Dca42612.1.exon4;Parent=Dca42612.1
scaffold48	Augus-PASA	exon	187592	187722	.	+	.	ID=Dca42612.1.exon5;Parent=Dca42612.1
scaffold48	Augus-PASA	exon	190469	190591	.	+	.	ID=Dca42612.1.exon6;Parent=Dca42612.1