Dca42620.1
Annotation
- 2-exons
- f-1
- sp|F4NCH2_BETVU#Putative uncharacterized protein#Beta vulgaris subsp vulgaris#unknown#GO:0004523;GO:0003723;GO:0003964;GO:0006278#3F1P0C
- sp|Q9FG26_ARATH#Non-LTR retroelement reverse transcriptase-like#Arabidopsis thaliana (Mouse-ear cress)#unknown#GO:0003676;GO:0004523;GO:0003964#3F0P0C
- Repeat List (scaffold48)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca42620.1 |
6 |
190 |
206 |
33.98 |
185 |
38 |
2e-26
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F4NCH2_BETVU |
1194 |
1376 |
1378 |
13.28 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca42620.1 |
12 |
158 |
206 |
26.21 |
147 |
37 |
4e-17
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G01410.1 |
138 |
284 |
294 |
50 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold48 |
Augustus |
mRNA |
259356 |
260449 |
. |
- |
. |
ID=Dca42620.1;Parent=Dca42620 |
| scaffold48 |
Augustus |
exon |
259356 |
259952 |
. |
- |
. |
ID=Dca42620.1.exon1;Parent=Dca42620.1 |
| scaffold48 |
Augustus |
exon |
260426 |
260449 |
. |
- |
. |
ID=Dca42620.1.exon2;Parent=Dca42620.1 |
