Carnation DB

Dca42642.1

Annotation

6-exons
f-1
sp|F6HU66_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_02s0025g02400#GO:0008168#1F0P0C
Os02t0672600-01 Similar to N6-adenosine-methyltransferase 70 kDa subunit (EC 2.1.1.62) (MT-A70) (Methyltransferase-like protein 3). Splice isoform 2.
Repeat List (scaffold480)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42642.1	219	610	625	51.68	392	82	0
Target_name	Start	End	Length	Cov(%)
sp\|F6HU66_VITVI	347	744	764	52.09

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42642.1	235	573	625	46.4	339	86	0
Target_name	Start	End	Length	Cov(%)
Os02t0672600-01	337	676	707	48.09

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold480	Augustus	mRNA	3011	6430	.	+	.	ID=Dca42642.1;Parent=Dca42642
scaffold480	Augustus	exon	3011	3904	.	+	.	ID=Dca42642.1.exon1;Parent=Dca42642.1
scaffold480	Augustus	exon	4155	4238	.	+	.	ID=Dca42642.1.exon2;Parent=Dca42642.1
scaffold480	Augustus	exon	4332	4678	.	+	.	ID=Dca42642.1.exon3;Parent=Dca42642.1
scaffold480	Augus-PASA	exon	5336	5552	.	+	.	ID=Dca42642.1.exon4;Parent=Dca42642.1
scaffold480	Augus-PASA	exon	5642	5721	.	+	.	ID=Dca42642.1.exon5;Parent=Dca42642.1
scaffold480	Augus-PASA	exon	6175	6430	.	+	.	ID=Dca42642.1.exon6;Parent=Dca42642.1