Carnation DB

Dca42644.1

Annotation

5-exons
f-1
sp|A5CBE5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_02s0025g02470#unknown#0F0P0C
Repeat List (scaffold480)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42644.1	5	262	262	44.27	258	45	1e-53
Target_name	Start	End	Length	Cov(%)
sp\|A5CBE5_VITVI	1	248	252	98.41

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42644.1	49	236	262	31.67	188	45	2e-43
Target_name	Start	End	Length	Cov(%)
Os04t0585600-01	32	216	241	76.76

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold480	Augus-PASA	mRNA	9786	10993	.	-	.	ID=Dca42644.1;Parent=Dca42644
scaffold480	Augus-PASA	exon	9786	9923	.	-	.	ID=Dca42644.1.exon1;Parent=Dca42644.1
scaffold480	Augus-PASA	exon	10015	10143	.	-	.	ID=Dca42644.1.exon2;Parent=Dca42644.1
scaffold480	Augus-PASA	exon	10268	10343	.	-	.	ID=Dca42644.1.exon3;Parent=Dca42644.1
scaffold480	Augus-PASA	exon	10451	10530	.	-	.	ID=Dca42644.1.exon4;Parent=Dca42644.1
scaffold480	Augus-PASA	exon	10628	10993	.	-	.	ID=Dca42644.1.exon5;Parent=Dca42644.1