Carnation DB

Dca42656.1

Annotation

8-exons
f-1
sp|B9H1T2_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_858804#GO:0005524;GO:0004674#2F0P0C
AT4G23130.2 | Symbols: CRK5, RLK6 | cysteine-rich RLK (RECEPTOR-like protein kinase) 5 | chr4:12117688-12120134 REVERSE LENGTH=663
Repeat List (scaffold480)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42656.1	180	498	520	34.23	319	56	1e-104
Target_name	Start	End	Length	Cov(%)
sp\|B9H1T2_POPTR	316	631	671	47.09

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42656.1	176	505	520	31.73	330	50	4e-101
Target_name	Start	End	Length	Cov(%)
AT4G23130.2	314	640	663	49.32

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold480	Augustus	mRNA	128211	130478	.	-	.	ID=Dca42656.1;Parent=Dca42656
scaffold480	Augustus	exon	128211	128501	.	-	.	ID=Dca42656.1.exon1;Parent=Dca42656.1
scaffold480	Augustus	exon	128591	128744	.	-	.	ID=Dca42656.1.exon2;Parent=Dca42656.1
scaffold480	Augustus	exon	128893	129130	.	-	.	ID=Dca42656.1.exon3;Parent=Dca42656.1
scaffold480	Augustus	exon	129219	129429	.	-	.	ID=Dca42656.1.exon4;Parent=Dca42656.1
scaffold480	Augustus	exon	129516	129655	.	-	.	ID=Dca42656.1.exon5;Parent=Dca42656.1
scaffold480	Augustus	exon	129731	129889	.	-	.	ID=Dca42656.1.exon6;Parent=Dca42656.1
scaffold480	Augustus	exon	129984	130043	.	-	.	ID=Dca42656.1.exon7;Parent=Dca42656.1
scaffold480	Augustus	exon	130169	130478	.	-	.	ID=Dca42656.1.exon8;Parent=Dca42656.1