Dca42708.1
Annotation
- 3-exons
- f-1
- sp|F4NCI7_BETVU#Putative uncharacterized protein#Beta vulgaris subsp vulgaris#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Os06t0484800-00 Reverse transcriptase domain containing protein.
- Repeat List (scaffold481)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca42708.1 |
1 |
192 |
412 |
22.33 |
192 |
48 |
3e-46
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F4NCI7_BETVU |
599 |
790 |
1362 |
14.09 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca42708.1 |
2 |
189 |
412 |
14.32 |
188 |
32 |
7e-21
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0484800-00 |
516 |
704 |
857 |
22.05 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold481 |
Augustus |
mRNA |
88321 |
90121 |
. |
- |
. |
ID=Dca42708.1;Parent=Dca42708 |
| scaffold481 |
Augustus |
exon |
88321 |
88717 |
. |
- |
. |
ID=Dca42708.1.exon1;Parent=Dca42708.1 |
| scaffold481 |
Augustus |
exon |
88787 |
89081 |
. |
- |
. |
ID=Dca42708.1.exon2;Parent=Dca42708.1 |
| scaffold481 |
Augustus |
exon |
89575 |
90121 |
. |
- |
. |
ID=Dca42708.1.exon3;Parent=Dca42708.1 |
