Carnation DB

Dca42733.1

Annotation

12-exons
f-1
sp|D7SLF9_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_06s0004g00950#GO:0008270#1F0P0C
sp|B9SY00_RICCO#Ubiquitin-protein ligase bre-1, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1455450#GO:0016874;GO:0008270#2F0P0C
Repeat List (scaffold4815)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42733.1	1	552	556	56.47	552	53	1e-153
Target_name	Start	End	Length	Cov(%)
sp\|D7SLF9_VITVI	37	620	879	66.43

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42733.1	1	552	556	45.32	552	42	4e-114
Target_name	Start	End	Length	Cov(%)
AT1G55250.1	60	641	900	64.66

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4815	Augustus	mRNA	19446	23199	.	+	.	ID=Dca42733.1;Parent=Dca42733
scaffold4815	Augustus	exon	19446	19583	.	+	.	ID=Dca42733.1.exon1;Parent=Dca42733.1
scaffold4815	Augustus	exon	19711	19798	.	+	.	ID=Dca42733.1.exon2;Parent=Dca42733.1
scaffold4815	Augustus	exon	19905	20144	.	+	.	ID=Dca42733.1.exon3;Parent=Dca42733.1
scaffold4815	Augustus	exon	20275	20478	.	+	.	ID=Dca42733.1.exon4;Parent=Dca42733.1
scaffold4815	Augustus	exon	20615	20808	.	+	.	ID=Dca42733.1.exon5;Parent=Dca42733.1
scaffold4815	Augustus	exon	20913	20996	.	+	.	ID=Dca42733.1.exon6;Parent=Dca42733.1
scaffold4815	Augustus	exon	21389	21575	.	+	.	ID=Dca42733.1.exon7;Parent=Dca42733.1
scaffold4815	Augustus	exon	21658	21818	.	+	.	ID=Dca42733.1.exon8;Parent=Dca42733.1
scaffold4815	Augustus	exon	22337	22408	.	+	.	ID=Dca42733.1.exon9;Parent=Dca42733.1
scaffold4815	Augustus	exon	22517	22593	.	+	.	ID=Dca42733.1.exon10;Parent=Dca42733.1
scaffold4815	Augustus	exon	22854	23048	.	+	.	ID=Dca42733.1.exon11;Parent=Dca42733.1
scaffold4815	Augustus	exon	23169	23199	.	+	.	ID=Dca42733.1.exon12;Parent=Dca42733.1