Carnation DB

Dca42759.1

Annotation

5-exons
f-1
sp|B9H3T8_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_199111#unknown#0F0P0C
AT5G08120.1 | Symbols: MPB2C | movement protein binding protein 2C | chr5:2600743-2602678 REVERSE LENGTH=326
Repeat List (scaffold482)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42759.1	1	318	324	56.48	318	54	8e-89
Target_name	Start	End	Length	Cov(%)
sp\|B9H3T8_POPTR	1	340	340	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42759.1	33	318	324	43.2	286	49	5e-67
Target_name	Start	End	Length	Cov(%)
AT5G08120.1	40	324	326	87.42

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold482	Augus-PASA	mRNA	115343	118189	.	-	.	ID=Dca42759.1;Parent=Dca42759
scaffold482	Augus-PASA	exon	115343	115510	.	-	.	ID=Dca42759.1.exon1;Parent=Dca42759.1
scaffold482	Augus-PASA	exon	115802	116020	.	-	.	ID=Dca42759.1.exon2;Parent=Dca42759.1
scaffold482	Augus-PASA	exon	116426	116755	.	-	.	ID=Dca42759.1.exon3;Parent=Dca42759.1
scaffold482	Augus-PASA	exon	117644	117721	.	-	.	ID=Dca42759.1.exon4;Parent=Dca42759.1
scaffold482	Augus-PASA	exon	118010	118189	.	-	.	ID=Dca42759.1.exon5;Parent=Dca42759.1