Carnation DB

Dca4279.1

Annotation

8-exons
f-1
sp|Q8S8Z0_MESCR#Protein phosphatase 2C#Mesembryanthemum crystallinum (Common ice plant) (Cryophytum crystallinum)#Name=MPC9#GO:0008287;GO:0046872;GO:0004722;GO:0006470#2F1P1C
Repeat List (scaffold1159)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4279.1	1	314	325	85.84	314	89	8e-160
Target_name	Start	End	Length	Cov(%)
sp\|Q8S8Z0_MESCR	1	316	319	99.05

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4279.1	1	295	325	77.84	295	85	1e-148
Target_name	Start	End	Length	Cov(%)
AT4G31750.1	1	299	311	96.14

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1159	Augus-PASA	mRNA	29270	34077	.	-	.	ID=Dca4279.1;Parent=Dca4279
scaffold1159	Augus-PASA	exon	29270	29527	.	-	.	ID=Dca4279.1.exon1;Parent=Dca4279.1
scaffold1159	Augus-PASA	exon	29622	29696	.	-	.	ID=Dca4279.1.exon2;Parent=Dca4279.1
scaffold1159	Augus-PASA	exon	30269	30360	.	-	.	ID=Dca4279.1.exon3;Parent=Dca4279.1
scaffold1159	Augus-PASA	exon	30443	30529	.	-	.	ID=Dca4279.1.exon4;Parent=Dca4279.1
scaffold1159	Augus-PASA	exon	31429	31587	.	-	.	ID=Dca4279.1.exon5;Parent=Dca4279.1
scaffold1159	Augus-PASA	exon	31699	31797	.	-	.	ID=Dca4279.1.exon6;Parent=Dca4279.1
scaffold1159	Augus-PASA	exon	32005	32132	.	-	.	ID=Dca4279.1.exon7;Parent=Dca4279.1
scaffold1159	Augustus	exon	33998	34077	.	-	.	ID=Dca4279.1.exon8;Parent=Dca4279.1