Dca42825.1
Annotation
- 3-exons
- f-1
- sp|A5C9U3_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_010121#GO:0003723;GO:0003964;GO:0008270;GO:0006278#3F1P0C
- sp|Q2QRV0_ORYSJ#Retrotransposon protein, putative, Ty3-gypsy subclass#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os12g26320#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Repeat List (scaffold4832)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca42825.1 |
17 |
127 |
127 |
57.48 |
111 |
58 |
4e-35
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5C9U3_VITVI |
931 |
1057 |
1797 |
7.06 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca42825.1 |
51 |
127 |
127 |
33.07 |
77 |
55 |
5e-19
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0202300-03 |
60 |
136 |
591 |
13.02 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4832 |
Augustus |
mRNA |
17321 |
19063 |
. |
+ |
. |
ID=Dca42825.1;Parent=Dca42825 |
| scaffold4832 |
Augustus |
exon |
17321 |
17397 |
. |
+ |
. |
ID=Dca42825.1.exon1;Parent=Dca42825.1 |
| scaffold4832 |
Augustus |
exon |
18628 |
18701 |
. |
+ |
. |
ID=Dca42825.1.exon2;Parent=Dca42825.1 |
| scaffold4832 |
Augustus |
exon |
18831 |
19063 |
. |
+ |
. |
ID=Dca42825.1.exon3;Parent=Dca42825.1 |
