Carnation DB

Dca42826.1

Annotation

5-exons
f-1
sp|Q5WMN7_ORYSJ#Putative polyprotein#Oryza sativa subsp japonica (Rice)#Name=P0683B02.1#GO:0004523;GO:0003723;GO:0003964;GO:0015074;GO:0006278#3F2P0C
Repeat List (scaffold4832)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42826.1	32	134	502	7.76	103	38	3e-13
Target_name	Start	End	Length	Cov(%)
sp\|Q5WMN7_ORYSJ	2249	2352	3092	3.36

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42826.1	378	490	502	6.57	113	30	4e-09
Target_name	Start	End	Length	Cov(%)
Os04t0191000-01	1204	1312	1539	7.08

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold4832	Augustus	mRNA	20854	23347	.	+	.	ID=Dca42826.1;Parent=Dca42826
scaffold4832	Augustus	exon	20854	20934	.	+	.	ID=Dca42826.1.exon1;Parent=Dca42826.1
scaffold4832	Augustus	exon	21045	21373	.	+	.	ID=Dca42826.1.exon2;Parent=Dca42826.1
scaffold4832	Augustus	exon	21758	22269	.	+	.	ID=Dca42826.1.exon3;Parent=Dca42826.1
scaffold4832	Augustus	exon	22474	22697	.	+	.	ID=Dca42826.1.exon4;Parent=Dca42826.1
scaffold4832	Augustus	exon	22985	23347	.	+	.	ID=Dca42826.1.exon5;Parent=Dca42826.1