Dca42827.1
Annotation
- 2-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold4833)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca42827.1 |
12 |
364 |
364 |
36.81 |
353 |
35 |
2e-53
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
54 |
431 |
1501 |
25.18 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca42827.1 |
34 |
170 |
364 |
10.98 |
137 |
30 |
4e-08
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0315200-01 |
115 |
251 |
296 |
46.28 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4833 |
Augustus |
mRNA |
6807 |
8021 |
. |
+ |
. |
ID=Dca42827.1;Parent=Dca42827 |
| scaffold4833 |
Augustus |
exon |
6807 |
6908 |
. |
+ |
. |
ID=Dca42827.1.exon1;Parent=Dca42827.1 |
| scaffold4833 |
Augustus |
exon |
7029 |
8021 |
. |
+ |
. |
ID=Dca42827.1.exon2;Parent=Dca42827.1 |
