Dca42828.1
Annotation
- 2-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold4833)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca42828.1 |
1 |
367 |
367 |
67.3 |
367 |
62 |
6e-140
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
450 |
849 |
1501 |
26.64 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca42828.1 |
1 |
367 |
367 |
42.5 |
367 |
39 |
1e-79
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0142900-02 |
137 |
538 |
707 |
56.85 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4833 |
Augustus |
mRNA |
8073 |
9269 |
. |
+ |
. |
ID=Dca42828.1;Parent=Dca42828 |
| scaffold4833 |
Augustus |
exon |
8073 |
8700 |
. |
+ |
. |
ID=Dca42828.1.exon1;Parent=Dca42828.1 |
| scaffold4833 |
Augustus |
exon |
8794 |
9269 |
. |
+ |
. |
ID=Dca42828.1.exon2;Parent=Dca42828.1 |
