Carnation DB

Dca42856.1

Annotation

12-exons
f-1
sp|F6HE19_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_05s0020g04980#unknown#0F0P0C
AT1G04300.3 | Symbols: | TRAF-like superfamily protein | chr1:1148818-1153895 REVERSE LENGTH=1082
Repeat List (scaffold484)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42856.1	3	1146	1146	63.43	1144	63	0
Target_name	Start	End	Length	Cov(%)
sp\|F6HE19_VITVI	1	1146	1146	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42856.1	7	1146	1146	50.26	1140	49	0
Target_name	Start	End	Length	Cov(%)
AT1G04300.3	4	1082	1082	99.72

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold484	Augustus	mRNA	24070	30907	.	-	.	ID=Dca42856.1;Parent=Dca42856
scaffold484	Augustus	exon	24070	25488	.	-	.	ID=Dca42856.1.exon1;Parent=Dca42856.1
scaffold484	Augustus	exon	25787	25991	.	-	.	ID=Dca42856.1.exon2;Parent=Dca42856.1
scaffold484	Augustus	exon	26070	26527	.	-	.	ID=Dca42856.1.exon3;Parent=Dca42856.1
scaffold484	Augustus	exon	27009	27159	.	-	.	ID=Dca42856.1.exon4;Parent=Dca42856.1
scaffold484	Augustus	exon	27243	27355	.	-	.	ID=Dca42856.1.exon5;Parent=Dca42856.1
scaffold484	Augustus	exon	27765	28113	.	-	.	ID=Dca42856.1.exon6;Parent=Dca42856.1
scaffold484	Augustus	exon	28469	28627	.	-	.	ID=Dca42856.1.exon7;Parent=Dca42856.1
scaffold484	Augustus	exon	28939	29068	.	-	.	ID=Dca42856.1.exon8;Parent=Dca42856.1
scaffold484	Augustus	exon	29149	29217	.	-	.	ID=Dca42856.1.exon9;Parent=Dca42856.1
scaffold484	Augustus	exon	29333	29421	.	-	.	ID=Dca42856.1.exon10;Parent=Dca42856.1
scaffold484	Augustus	exon	29844	29955	.	-	.	ID=Dca42856.1.exon11;Parent=Dca42856.1
scaffold484	Augustus	exon	30721	30907	.	-	.	ID=Dca42856.1.exon12;Parent=Dca42856.1