Carnation DB

Dca42857.1

Annotation

9-exons
f-1
sp|B9HKF5_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_820808#GO:0003723#1F0P0C
AT5G52070.1 | Symbols: | Agenet domain-containing protein | chr5:21162116-21164717 FORWARD LENGTH=271
Repeat List (scaffold484)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42857.1	19	253	420	24.76	235	45	5e-49
Target_name	Start	End	Length	Cov(%)
sp\|B9HKF5_POPTR	2	237	263	89.73

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42857.1	23	195	420	17.14	173	42	2e-33
Target_name	Start	End	Length	Cov(%)
AT5G52070.1	6	177	271	63.46

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold484	Augustus	mRNA	35039	39434	.	+	.	ID=Dca42857.1;Parent=Dca42857
scaffold484	Augustus	exon	35039	35065	.	+	.	ID=Dca42857.1.exon1;Parent=Dca42857.1
scaffold484	Augus-PASA	exon	35192	35308	.	+	.	ID=Dca42857.1.exon2;Parent=Dca42857.1
scaffold484	Augus-PASA	exon	35619	35685	.	+	.	ID=Dca42857.1.exon3;Parent=Dca42857.1
scaffold484	Augus-PASA	exon	36166	36413	.	+	.	ID=Dca42857.1.exon4;Parent=Dca42857.1
scaffold484	Augus-PASA	exon	36563	36679	.	+	.	ID=Dca42857.1.exon5;Parent=Dca42857.1
scaffold484	Augus-PASA	exon	37464	37515	.	+	.	ID=Dca42857.1.exon6;Parent=Dca42857.1
scaffold484	Augustus	exon	38159	38694	.	+	.	ID=Dca42857.1.exon7;Parent=Dca42857.1
scaffold484	Augustus	exon	39187	39249	.	+	.	ID=Dca42857.1.exon8;Parent=Dca42857.1
scaffold484	Augustus	exon	39399	39434	.	+	.	ID=Dca42857.1.exon9;Parent=Dca42857.1