Dca42878.1
Annotation
- 4-exons
- f-1
- sp|O23864_9ORYZ#Polyprotein#Oryza australiensis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold4843)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca42878.1 |
1 |
423 |
665 |
36.39 |
423 |
53 |
6e-134
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O23864_9ORYZ |
534 |
990 |
1317 |
34.7 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca42878.1 |
11 |
416 |
665 |
23.3 |
406 |
32 |
7e-61
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
585 |
1074 |
1401 |
34.97 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4843 |
Augustus |
mRNA |
18 |
5585 |
. |
+ |
. |
ID=Dca42878.1;Parent=Dca42878 |
| scaffold4843 |
Augustus |
exon |
18 |
210 |
. |
+ |
. |
ID=Dca42878.1.exon1;Parent=Dca42878.1 |
| scaffold4843 |
Augustus |
exon |
313 |
1387 |
. |
+ |
. |
ID=Dca42878.1.exon2;Parent=Dca42878.1 |
| scaffold4843 |
Augustus |
exon |
4518 |
4587 |
. |
+ |
. |
ID=Dca42878.1.exon3;Parent=Dca42878.1 |
| scaffold4843 |
Augustus |
exon |
4926 |
5585 |
. |
+ |
. |
ID=Dca42878.1.exon4;Parent=Dca42878.1 |
