Carnation DB

Dca42907.1

Annotation

13-exons
f-1
sp|F6H092_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_18s0001g15280#GO:0005622;GO:0004527;GO:0003676#2F0P1C
sp|B9S2M9_RICCO#Rnase h, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0559410#GO:0005622;GO:0008859;GO:0003676#2F0P1C
Repeat List (scaffold485)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42907.1	429	493	494	8.09	65	62	6e-14
Target_name	Start	End	Length	Cov(%)
sp\|F6H092_VITVI	510	571	572	10.83

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42907.1	447	493	494	6.88	47	73	1e-12
Target_name	Start	End	Length	Cov(%)
AT5G25800.1	520	566	567	8.28

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold485	Augustus	mRNA	100736	105624	.	-	.	ID=Dca42907.1;Parent=Dca42907
scaffold485	Augustus	exon	100736	100859	.	-	.	ID=Dca42907.1.exon1;Parent=Dca42907.1
scaffold485	Augustus	exon	100980	101002	.	-	.	ID=Dca42907.1.exon2;Parent=Dca42907.1
scaffold485	Augustus	exon	101359	101540	.	-	.	ID=Dca42907.1.exon3;Parent=Dca42907.1
scaffold485	Augustus	exon	101626	101893	.	-	.	ID=Dca42907.1.exon4;Parent=Dca42907.1
scaffold485	Augustus	exon	101998	102058	.	-	.	ID=Dca42907.1.exon5;Parent=Dca42907.1
scaffold485	Augustus	exon	102283	102338	.	-	.	ID=Dca42907.1.exon6;Parent=Dca42907.1
scaffold485	Augustus	exon	102772	102831	.	-	.	ID=Dca42907.1.exon7;Parent=Dca42907.1
scaffold485	Augustus	exon	103003	103073	.	-	.	ID=Dca42907.1.exon8;Parent=Dca42907.1
scaffold485	Augustus	exon	103171	103296	.	-	.	ID=Dca42907.1.exon9;Parent=Dca42907.1
scaffold485	Augustus	exon	103586	103695	.	-	.	ID=Dca42907.1.exon10;Parent=Dca42907.1
scaffold485	Augustus	exon	103781	103977	.	-	.	ID=Dca42907.1.exon11;Parent=Dca42907.1
scaffold485	Augustus	exon	104783	104848	.	-	.	ID=Dca42907.1.exon12;Parent=Dca42907.1
scaffold485	Augustus	exon	105484	105624	.	-	.	ID=Dca42907.1.exon13;Parent=Dca42907.1