Carnation DB

Dca42944.1

Annotation

6-exons
f-1
sp|E0CRQ4_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_18s0001g06600#unknown#0F0P0C
Repeat List (scaffold486)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42944.1	1	330	331	58	330	59	3e-100
Target_name	Start	End	Length	Cov(%)
sp\|E0CRQ4_VITVI	1	330	331	99.69

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42944.1	1	310	331	43.2	310	46	2e-68
Target_name	Start	End	Length	Cov(%)
AT1G14680.1	1	287	290	98.96

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold486	Augus-PASA	mRNA	25516	27917	.	+	.	ID=Dca42944.1;Parent=Dca42944
scaffold486	Augus-PASA	exon	25516	25707	.	+	.	ID=Dca42944.1.exon1;Parent=Dca42944.1
scaffold486	Augus-PASA	exon	25903	26175	.	+	.	ID=Dca42944.1.exon2;Parent=Dca42944.1
scaffold486	Augus-PASA	exon	27090	27250	.	+	.	ID=Dca42944.1.exon3;Parent=Dca42944.1
scaffold486	Augus-PASA	exon	27378	27483	.	+	.	ID=Dca42944.1.exon4;Parent=Dca42944.1
scaffold486	Augus-PASA	exon	27576	27701	.	+	.	ID=Dca42944.1.exon5;Parent=Dca42944.1
scaffold486	Augus-PASA	exon	27780	27917	.	+	.	ID=Dca42944.1.exon6;Parent=Dca42944.1