Dca42953.1
Annotation
- 4-exons
- f-1
- sp|Q9MBB9_SALGI#Polygalacturonase#Salix gilgiana (Willow)#Name=SgPG2#GO:0005576;GO:0004650;GO:0005975;GO:0007047#1F2P1C
- Repeat List (scaffold486)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca42953.1 |
20 |
399 |
408 |
49.75 |
380 |
54 |
1e-125
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9MBB9_SALGI |
20 |
393 |
393 |
95.16 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca42953.1 |
26 |
400 |
408 |
51.22 |
375 |
56 |
6e-122
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT3G14040.1 |
66 |
438 |
445 |
83.82 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold486 |
Augustus |
mRNA |
79001 |
80497 |
. |
- |
. |
ID=Dca42953.1;Parent=Dca42953 |
| scaffold486 |
Augustus |
exon |
79001 |
79252 |
. |
- |
. |
ID=Dca42953.1.exon1;Parent=Dca42953.1 |
| scaffold486 |
Augustus |
exon |
79333 |
79848 |
. |
- |
. |
ID=Dca42953.1.exon2;Parent=Dca42953.1 |
| scaffold486 |
Augustus |
exon |
79931 |
80251 |
. |
- |
. |
ID=Dca42953.1.exon3;Parent=Dca42953.1 |
| scaffold486 |
Augustus |
exon |
80360 |
80497 |
. |
- |
. |
ID=Dca42953.1.exon4;Parent=Dca42953.1 |
