Carnation DB

Dca42954.1

Annotation

10-exons
f-1
sp|A9PFH5_POPTR#Putative uncharacterized protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#unknown#GO:0005524;GO:0004828;GO:0006434#2F1P0C
AT1G11870.2 | Symbols: ATSRS, SRS | Seryl-tRNA synthetase | chr1:4003895-4006556 FORWARD LENGTH=514
Repeat List (scaffold486)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42954.1	91	527	529	65.59	437	80	0
Target_name	Start	End	Length	Cov(%)
sp\|A9PFH5_POPTR	83	521	523	83.93

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca42954.1	32	529	529	64.46	498	67	0
Target_name	Start	End	Length	Cov(%)
AT1G11870.2	3	514	514	99.61

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold486	Augustus	mRNA	80993	83782	.	-	.	ID=Dca42954.1;Parent=Dca42954
scaffold486	Augustus	exon	80993	81262	.	-	.	ID=Dca42954.1.exon1;Parent=Dca42954.1
scaffold486	Augustus	exon	81499	81592	.	-	.	ID=Dca42954.1.exon2;Parent=Dca42954.1
scaffold486	Augustus	exon	81699	81833	.	-	.	ID=Dca42954.1.exon3;Parent=Dca42954.1
scaffold486	Augustus	exon	81990	82156	.	-	.	ID=Dca42954.1.exon4;Parent=Dca42954.1
scaffold486	Augustus	exon	82270	82449	.	-	.	ID=Dca42954.1.exon5;Parent=Dca42954.1
scaffold486	Augustus	exon	82544	82636	.	-	.	ID=Dca42954.1.exon6;Parent=Dca42954.1
scaffold486	Augustus	exon	82723	82871	.	-	.	ID=Dca42954.1.exon7;Parent=Dca42954.1
scaffold486	Augustus	exon	82955	83048	.	-	.	ID=Dca42954.1.exon8;Parent=Dca42954.1
scaffold486	Augustus	exon	83150	83319	.	-	.	ID=Dca42954.1.exon9;Parent=Dca42954.1
scaffold486	Augustus	exon	83545	83782	.	-	.	ID=Dca42954.1.exon10;Parent=Dca42954.1