Dca42962.1
Annotation
- 2-exons
- f-1
- sp|B9GUY3_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_830231#unknown#0F0P0C
- sp|B9RJN1_RICCO#Ubiquitin-protein ligase, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_1036630#GO:0016874#1F0P0C
- Repeat List (scaffold486)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca42962.1 |
16 |
319 |
319 |
56.11 |
304 |
57 |
3e-93
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9GUY3_POPTR |
8 |
321 |
321 |
97.81 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca42962.1 |
16 |
319 |
319 |
55.17 |
304 |
56 |
1e-88
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G08980.1 |
8 |
317 |
317 |
97.79 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold486 |
Augus-PASA |
mRNA |
131761 |
133529 |
. |
- |
. |
ID=Dca42962.1;Parent=Dca42962 |
| scaffold486 |
Augus-PASA |
exon |
131761 |
132388 |
. |
- |
. |
ID=Dca42962.1.exon1;Parent=Dca42962.1 |
| scaffold486 |
Augustus |
exon |
133198 |
133529 |
. |
- |
. |
ID=Dca42962.1.exon2;Parent=Dca42962.1 |
