Dca42970.1
Annotation
- 3-exons
- f-1
- sp|D3IVU0_9POAL#Putative retrotransposon protein#Phyllostachys edulis#unknown#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold4862)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca42970.1 |
49 |
171 |
175 |
49.71 |
123 |
71 |
1e-47
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D3IVU0_9POAL |
773 |
895 |
896 |
13.72 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca42970.1 |
49 |
160 |
175 |
25.14 |
112 |
40 |
9e-16
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
1275 |
1384 |
1401 |
7.85 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold4862 |
Augustus |
mRNA |
9004 |
9776 |
. |
+ |
. |
ID=Dca42970.1;Parent=Dca42970 |
| scaffold4862 |
Augustus |
exon |
9004 |
9108 |
. |
+ |
. |
ID=Dca42970.1.exon1;Parent=Dca42970.1 |
| scaffold4862 |
Augustus |
exon |
9184 |
9222 |
. |
+ |
. |
ID=Dca42970.1.exon2;Parent=Dca42970.1 |
| scaffold4862 |
Augustus |
exon |
9393 |
9776 |
. |
+ |
. |
ID=Dca42970.1.exon3;Parent=Dca42970.1 |
