Carnation DB

Dca43183.1

Annotation

5-exons
f-1
sp|D7TEC6_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_12s0059g01180#GO:0003677;GO:0008270#2F0P0C
AT4G22140.1 | Symbols: EBS | PHD finger family protein / bromo-adjacent homology (BAH) domain-containing protein | chr4:11728556-11730230 REVERSE LENGTH=234
Repeat List (scaffold49)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43183.1	1	216	216	84.25	216	85	1e-108
Target_name	Start	End	Length	Cov(%)
sp\|D7TEC6_VITVI	1	215	215	100

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca43183.1	1	209	216	79.16	209	79	3e-103
Target_name	Start	End	Length	Cov(%)
AT4G22140.1	1	217	234	92.73

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold49	Augustus	mRNA	288115	290584	.	-	.	ID=Dca43183.1;Parent=Dca43183
scaffold49	Augustus	exon	288115	288141	.	-	.	ID=Dca43183.1.exon1;Parent=Dca43183.1
scaffold49	Augustus	exon	288760	288898	.	-	.	ID=Dca43183.1.exon2;Parent=Dca43183.1
scaffold49	Augustus	exon	289621	289689	.	-	.	ID=Dca43183.1.exon3;Parent=Dca43183.1
scaffold49	Augustus	exon	289811	290153	.	-	.	ID=Dca43183.1.exon4;Parent=Dca43183.1
scaffold49	Augustus	exon	290512	290584	.	-	.	ID=Dca43183.1.exon5;Parent=Dca43183.1