Dca43195.1
Annotation
- 2-exons
- f-1
- sp|B9IH77_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_667133#GO:0005622;GO:0016881;GO:0006464#1F1P1C
- AT4G12570.1 | Symbols: UPL5 | ubiquitin protein ligase 5 | chr4:7445585-7448819 FORWARD LENGTH=873
- Repeat List (scaffold49)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca43195.1 |
1 |
262 |
262 |
70.99 |
262 |
71 |
2e-112
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9IH77_POPTR |
34 |
294 |
294 |
88.77 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca43195.1 |
1 |
262 |
262 |
60.3 |
262 |
61 |
2e-94
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G12570.1 |
612 |
873 |
873 |
30.01 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold49 |
Augustus |
mRNA |
378550 |
380221 |
. |
- |
. |
ID=Dca43195.1;Parent=Dca43195 |
| scaffold49 |
Augustus |
exon |
378550 |
378813 |
. |
- |
. |
ID=Dca43195.1.exon1;Parent=Dca43195.1 |
| scaffold49 |
Augustus |
exon |
379697 |
380221 |
. |
- |
. |
ID=Dca43195.1.exon2;Parent=Dca43195.1 |
