Carnation DB

Dca4336.1

Annotation

7-exons
f-1
sp|A5AJU2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_002856#unknown#0F0P0C
Os05t0123300-00 Defects-in-morphology protein 1-like, mitochondrial domain containing protein.
Repeat List (scaffold1160)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4336.1	21	349	355	56.33	329	61	5e-112
Target_name	Start	End	Length	Cov(%)
sp\|A5AJU2_VITVI	75	402	402	81.59

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4336.1	57	339	355	44.78	283	57	3e-96
Target_name	Start	End	Length	Cov(%)
Os05t0123300-00	86	368	378	74.86

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1160	Augustus	mRNA	50254	57004	.	+	.	ID=Dca4336.1;Parent=Dca4336
scaffold1160	Augustus	exon	50254	50481	.	+	.	ID=Dca4336.1.exon1;Parent=Dca4336.1
scaffold1160	Augustus	exon	51719	51823	.	+	.	ID=Dca4336.1.exon2;Parent=Dca4336.1
scaffold1160	Augustus	exon	53364	53485	.	+	.	ID=Dca4336.1.exon3;Parent=Dca4336.1
scaffold1160	Augustus	exon	54564	54713	.	+	.	ID=Dca4336.1.exon4;Parent=Dca4336.1
scaffold1160	Augustus	exon	54829	54982	.	+	.	ID=Dca4336.1.exon5;Parent=Dca4336.1
scaffold1160	Augustus	exon	56157	56233	.	+	.	ID=Dca4336.1.exon6;Parent=Dca4336.1
scaffold1160	Augustus	exon	56773	57004	.	+	.	ID=Dca4336.1.exon7;Parent=Dca4336.1