Dca4340.1
Annotation
- 4-exons
- f-1
- sp|Q5VNW9_ORYSJ#Florfenicol resistance protein-like#Oryza sativa subsp japonica (Rice)#Name=P0039G05.13#GO:0005737;GO:0051536;GO:0008173;GO:0006364#2F1P1C
- Repeat List (scaffold1160)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca4340.1 |
37 |
125 |
140 |
46.42 |
89 |
54 |
7e-30
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q5VNW9_ORYSJ |
43 |
164 |
247 |
49.39 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca4340.1 |
37 |
125 |
140 |
46.42 |
89 |
54 |
7e-31
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os01t0640800-01 |
201 |
322 |
406 |
30.04 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1160 |
Augustus |
mRNA |
84157 |
87164 |
. |
- |
. |
ID=Dca4340.1;Parent=Dca4340 |
| scaffold1160 |
Augustus |
exon |
84157 |
84229 |
. |
- |
. |
ID=Dca4340.1.exon1;Parent=Dca4340.1 |
| scaffold1160 |
Augustus |
exon |
84737 |
84873 |
. |
- |
. |
ID=Dca4340.1.exon2;Parent=Dca4340.1 |
| scaffold1160 |
Augustus |
exon |
85059 |
85151 |
. |
- |
. |
ID=Dca4340.1.exon3;Parent=Dca4340.1 |
| scaffold1160 |
Augustus |
exon |
87045 |
87164 |
. |
- |
. |
ID=Dca4340.1.exon4;Parent=Dca4340.1 |
