Carnation DB

Dca4349.1

Annotation

6-exons
f-1
sp|B9MTN7_POPTR#Histone deacetylase#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#Name=HDT903#GO:0005622;GO:0003676;GO:0008270#2F0P1C
Repeat List (scaffold1161)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4349.1	7	240	251	41.83	234	43	2e-23
Target_name	Start	End	Length	Cov(%)
sp\|B9MTN7_POPTR	5	238	271	86.34

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca4349.1	7	233	251	35.85	227	35	6e-19
Target_name	Start	End	Length	Cov(%)
AT5G22650.1	5	259	306	83.33

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1161	Augustus	mRNA	4530	6367	.	+	.	ID=Dca4349.1;Parent=Dca4349
scaffold1161	Augustus	exon	4530	4619	.	+	.	ID=Dca4349.1.exon1;Parent=Dca4349.1
scaffold1161	Augustus	exon	4724	4976	.	+	.	ID=Dca4349.1.exon2;Parent=Dca4349.1
scaffold1161	Augustus	exon	5283	5419	.	+	.	ID=Dca4349.1.exon3;Parent=Dca4349.1
scaffold1161	Augustus	exon	5534	5593	.	+	.	ID=Dca4349.1.exon4;Parent=Dca4349.1
scaffold1161	Augustus	exon	5674	5767	.	+	.	ID=Dca4349.1.exon5;Parent=Dca4349.1
scaffold1161	Augustus	exon	6246	6367	.	+	.	ID=Dca4349.1.exon6;Parent=Dca4349.1