Dca4352.1
Annotation
- 2-exons
- f-1
- sp|A5AFE2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_041217#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Os11t0656500-01 Integrase, catalytic core domain containing protein.
- Repeat List (scaffold1161)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca4352.1 |
14 |
1325 |
1346 |
47.99 |
1312 |
49 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5AFE2_VITVI |
2 |
1225 |
1269 |
96.45 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca4352.1 |
330 |
1319 |
1346 |
24.88 |
990 |
33 |
3e-160
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
379 |
1359 |
1401 |
70.02 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1161 |
Augustus |
mRNA |
51578 |
58280 |
. |
+ |
. |
ID=Dca4352.1;Parent=Dca4352 |
| scaffold1161 |
Augustus |
exon |
51578 |
55553 |
. |
+ |
. |
ID=Dca4352.1.exon1;Parent=Dca4352.1 |
| scaffold1161 |
Augustus |
exon |
58216 |
58280 |
. |
+ |
. |
ID=Dca4352.1.exon2;Parent=Dca4352.1 |
