Dca4363.1
Annotation
- 3-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold11618)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca4363.1 |
29 |
684 |
699 |
43.63 |
656 |
42 |
2e-156
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
19 |
721 |
1501 |
46.83 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca4363.1 |
371 |
684 |
699 |
16.88 |
314 |
37 |
5e-57
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0142900-02 |
93 |
410 |
707 |
44.97 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold11618 |
Augustus |
mRNA |
1062 |
7179 |
. |
- |
. |
ID=Dca4363.1;Parent=Dca4363 |
| scaffold11618 |
Augustus |
exon |
1062 |
2086 |
. |
- |
. |
ID=Dca4363.1.exon1;Parent=Dca4363.1 |
| scaffold11618 |
Augustus |
exon |
2176 |
3033 |
. |
- |
. |
ID=Dca4363.1.exon2;Parent=Dca4363.1 |
| scaffold11618 |
Augustus |
exon |
6963 |
7179 |
. |
- |
. |
ID=Dca4363.1.exon3;Parent=Dca4363.1 |
